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heritability

در نشریات گروه علوم دام
تکرار جستجوی کلیدواژه heritability در نشریات گروه کشاورزی
  • فرزانه شکری سنگری*، علی صادقی سفید مزگی، سعید انصاری مهیاری
    در طراحی برنامه های اصلاح نژدای، وجود برآوردهای صحیح از پارامترهای ژنتیکی ضروری است. ماندگاری یکی از صفات مهم اقتصادی در پرورش گاو شیری است. به طور کلی، توانایی گاو برای ماندن در گله و حذف نشدن، بدون توجه به دلیل آن، ماندگاری تعریف می شود. به طور جزیی تر میتوان ماندگاری را به صورت های دیگر از جمله: استقامت، بقا، تعداد دوره شیردهی، طول عمرتولیدی و طول عمر گله تعریف کرد. طی سال های گذشته، برآورد پارامترهای ژنتیکی برای صفات گوناگون ماندگاری در گاوهای شیری گزارش شده است. با این حال، این برآوردها از مطالعات بر اساس جمعیت های مختلف گاو شیری به دست آمده که منجر به تنوع قابل توجهی در بین برآوردهای وراثت پذیری و همبستگی ژنتیکی شده است؛ بنابراین، این مطالعه با هدف انجام یک فراتحلیل بر اساس یک مدل اثرات تصادفی برای ترکیب برآوردهای وراثت پذیری های منتشر شده برای صفات ماندگاری و همبستگی ژنتیکی آنها با صفات تولید شیر، تیپ، روزهای باز و امتیاز سلول های سوماتیک انجام شد. در مجموع، 66 مقاله منتشر شده بین سال های 1984 تا 2023 در مطالعه حاضر مورد استفاده قرار گرفت. پس از جمع آوری مقالات و استخراج پارامترها از آنها، برآورد پارامترهای ژنتیکی با روش فراتحلیل در نرم افزار Excel 2019 انجام شد. بررسی مطالعات انجام شده ناهمگنی زیادی را نشان داد بنابراین امکان استفاده از مدل با اثر ثابت وجود نداشت و از مدل با اثرات تصادفی استفاده شد. وراثت پذیری برای صفات طول عمر تولیدی، طول عمر گله، تعداد دوره شیردهی، استقامت و نرخ بقا به ترتیب 10/0، 08/0، 07/0، 10/0 و 04/0 بود. همبستگی ژنتیکی بین صفات ماندگاری و صفات تولیدی بسیار متغیر بود، بیشترین همبستگی ژنتیکی بین تولید چربی و طول عمر گله بود (95/0). به طور کلی همبستگی ژنتیکی بین اکثر صفات تیپ و ماندگاری منفی و کم بود. بالاترین همبستگی ژنتیکی مثبت بین امتیاز کلی تیپ و استقامت یافت شد (62/0). همبستگی ژنتیکی بین امتیاز سلول های سوماتیک با استقامت و نرخ بقا به ترتیب 13/0- و 38/0- بود. همبستگی ژنتیکی بین روزهای باز با طول عمر گله و طول عمر تولیدی به ترتیب 40/0 و 54/0- بود. نتایج این تحقیق می تواند در تدوین استراتژی های انتخاب برای بهبود ماندگاری در گاو شیری مفید باشد.
    کلید واژگان: همبستگی ژنتیکی، وراثت پذیری، هلشتاین، صفات تولیدی، صفات تیپ، فراتحلیل
    Farzaneh Shokri Sangari *, Ali Sadeghi-Sefidmazgi, Saeed Ansari Mahyari
    Designing effective breeding programs for dairy cattle relies on accurate estimates of genetic parameters for economically important traits. Extensive research over the years has explored genetic parameters associated with longevity in dairy cows. However, these estimates often come from studies using different cow populations, leading to significant variations in heritability and genetic correlations. Thus, this study aimed to conduct a meta-analysis based on a random-effects model to combine different published heritability estimates for longevity traits as well as their genetic correlations with milk production traits, type traits, days open (DO), and somatic cell score (SCS) in dairy cows. In total, 66 articles published between 1994 and 2023 were used in the present study. After gathering the articles and extracting the parameters, genetic parameters were estimated by meta-analysis method. pooled heritabilities for the productive life (PL), herd life (HL), Number of Lactation (NL), Stayability(ST), and Survival rate(SR) traits were 0.10, 0.08, 0.07, 0.10, and 0.04, respectively. Genetic correlations between most type and longevity traits were generally negative and low. The highest positive genetic correlation was found between the subjective score for type and ST (0.62). Genetic correlations between longevity (ST and SR) and SCS were -0.13 and -0.38, respectively. Genetic correlations between longevity (PL and HL) and DO were -0.54 and 0.40, respectively. Obtained results in the study can be useful to define animal breeding strategies to improve longevity in dairy cattle.
    Keywords: Genetic Correlation, Heritability, Holstein, Production Trait, Type Trait, Meta-Analysis
  • Jamshid Ehsaninia *, Farhad Ghafouri-Kesbi
    This research aimed to conduct a genetic analysis of maternal imprinting effects on growth and reproductive characteristics in the Murciano-Granadina goats. Data for the present study were recorded between 2016 and 2022 on a farm in the Kerman province, Iran. Traits studied were body weight at birth (WB) and weaning (WW), pre-weaning average daily gain (ADG), Kleiber ratio (KR) and growth efficiency (GE). Reproduction traits were litter size at birth (LSB), litter size at weaning (LSW), total litter size at birth (TLWB) and total litter size at weaning (TLWW). An animal model was used to analyze the data. Comparison of the models with and without maternal imprinting effects was performed using Akaike's information criterion (AIC). Maternal imprinting had a significant impact on WB and LSW. The heritability estimates for maternal imprinting ( ) were 0.07±0.07 for WB and 0.07±0.02 for LSW. Accounting for maternal imprinting effects into the model resulted in a reduction of 2% and 56% in the direct heritability of WB and LSW, respectively. In addition, the value of  for WB was reduced by approximately 75%. The results implied that there are maternal imprinting effects on the WB and LSW of Murciano-Granadina goats. Hence, the genetic evaluation models for these traits should consider the effect of maternal imprinting effect.
    Keywords: Body Weight, Goats, Heritability, Maternal Imprinting Effect, Variance Components
  • Farhad Ghafouri-Kesbi *
    The aim of the present study was to compare the predictive performance of the Bagging algorithm with other decision tree-based methods, including regression tree (RT), random forest (RF) and Boosting in genomic selection. A genome including ten chromosomes for 1,000 individuals on which 10,000 single nucleotide polymorphisms (SNP) were evenly distributed was simulated. QTL effects were assigned to 10% of the polymorphic SNPs, with effects sampled from a gamma distribution. Predictive performance measures including accuracy of prediction, reliability and bias were used to compare the methods. Computing time and memory requirements of the studied methods were also measured. In all methods studied, the accuracy of genomic evaluation increased following increase in the heritability level from 0.10 to 0.50. While RT was the most efficient user of time and memory, it was not recommended for genomic selection due to its poor predictive performance. The obtained results showed that the predictive performance of Bagging was equal to RF and higher than RT and Boosting. However, it required significantly higher computational time and memory requirements. Considering the overall performance, Bagging was recommended for genomic selection, especially when due to the size and structure of the genomic data, the use of RF is limited.
    Keywords: Gamma Distribution, Genomic Selection, Heritability, Regression Tree, SNP
  • شهلا نعمت اللهیان، سید حسین حسینی مقدم*، بابک ربیعی، سید ضیاءالدین میرحسینی

    کرم ابریشم آمیخته تجاری حاصل آمیزش های دوطرفه لاین های والدینی است. چنانچه جفت آمیخته حاصل از تلاقی مستقیم و معکوس عملکرد بسیار متفاوتی داشته باشند، برای عرضه به کشاورزان مناسب نیستند. در این تحقیق، تفاوت ها برای 10 صفت مهم در هر جفت آمیخته محاسبه و سپس 36 جفت آمیخته جدید کرم ابریشم برای تفاوت کل مقایسه شدند. دلایل ژنتیکی این تفاوت ها با برآورد اثرات ژنی، σ2gca /σ2sca، ضریب بیکر و وراثت پذیری عام و خاص با استفاده از تجزیه لاین × تستر به طور جداگانه برای آمیخته های مادر ژاپنی و مادر چینی بررسی شدند. نتایج مقایسه آمیخته های متقابل بر مبنای تفاوت کل نشان داد که این پارامتر در 14 جفت آمیخته بیش از متوسط کل بود. لذا این ها نمی توانند در سطح تجاری توزیع شوند. در 22 جفت آمیخته با تفاوت کل کمتر یا هیچ کدام از صفات و یا حداکثر یک صفت اختلاف معنی دار داشتند. ارزیابی آمیخته ها مشخص کرد که صفات وزن پیله و وزن قشر پیله بیش از سایرین تحت تاثیر آمیزش های متقابل قرار گرفتند. اثر آمیخته در جدول تجزیه واریانس لاین × تستر نیز نشان داد که بین تلاقی مستقیم و معکوس برای صفات وزن پیله و وزن قشر پیله و صفات مرتبط با آن یعنی وزن پیله 10 هزار لارو و درصد قشر پیله، تفاوت آشکاری وجود دارد. نسبت σ2gca /σ2sca، ضریب بیکر و مقادیر وراثت پذیری عام و خاص نشان داد که اثرات ژنتیکی افزایشی برای وزن پیله، وزن قشر پیله و درصد قشر پیله در آمیخته های مادر چینی بیشتر از مادر ژاپنی بود.

    کلید واژگان: انتخاب هیبرید، آمیخته دوطرفه، تجزیه لاین ×تستر، کرم ابریشم، وراثت پذیری
    Shahla Nematollahian, Seyed Hossein Hosseini Moghaddam *, Babak Rabiei, Seyed Ziaeddin Mirhoseini
    Introduction

    Commercial silkworm hybrids result from the controlled crossing of the Japanese-shaped parent with the Chinese-shaped parent (direct cross) and vice versa (reverse cross). Suppose the silkworm hybrids resulting from direct and reverse crossing have a large difference in the performance of the important productive, reproductive, and viability characteristics. In that case, they are not suitable for supply to the farmers. In this research, to identify the hybrid pairs with the least differences, the traits of 72 reciprocal hybrids (36 mating pairs) were tested by statistical methods. These results will be used for the final selection of commercial hybrids. Also, the genetic analysis of reciprocal hybrids and the estimation of genetic parameters in each of the mating programs were done separately using line × tester analysis. 

    Materials and Methods

    The current research was done at the Iran Silk Research Center by carrying out two mating programs in the form of line-tester crosses between six Chinese lines (IRA2, IRA4, IRA6, IRA8, IRA10, and IRA12) with six Japanese lines (IRA1, IRA3, IRA5, IRA7, IRA9, and IRA11). Six lines with dumbbell-shaped cocoons (Japanese) and six lines with oval-shaped cocoons (Chinese) were crossed bilaterally. All lines (12 genotypes) and 72 hybrids (36+36) were reared in a completely randomized design with 4 replications. All stages of hatching and rearing of silkworm lines and hybrids in this project were done in the same way based on standard methods. The studied traits including the number of cocoons per liter, cocoon weight per liter, best cocoons percentage, middle cocoons percentage, cocoon weight per 10,000 larvae, hatchability percentage, cocoon weight, cocoon shell weight, cocoon shell percentage, and pupation rate were recorded and analyzed by applying of GLM procedure of SAS software. Line×tester analysis was applied to study the reciprocal crossing effect and estimate genetic parameters. Gene effects, heritability, σ2gca/σ2sca, and Baker’s ratio were investigated by applying of IML procedure of SAS software. 

    Results and Discussion

    The results of the comparison of reciprocal hybrids based on the total difference (∑D) showed that this parameter was more than the total average in 14 pairs of hybrids. Therefore they could not be selected for commercial level. In the other 22 pairs, either none of the traits or at most one trait had a significant difference (P<0.05). The results showed that the characteristics of cocoon weight and cocoon shell weight were more affected by reciprocal crossing. On the other hand, the number of cocoons per liter, the hatchability percentage and the middle cocoon percentage were higher in Chinese mother hybrids than in Japanese mothers. For other traits (weight per liter, cocoon weight per 10,000 larvae, pupation percentage, good cocoon percentage and pupation percentage), Japanese mother hybrids were almost superior. The comparison of crosses effect in Japanese-shape lines and Chinese-shape testers with Chinese-shape lines and Japanese-shape testers showed that four traits (cocoon weight, cocoon shell weight, cocoon shell percentage and cocoon weight per 10 thousand larvae) and for the interaction effect (line × tester), three Traits (cocoon weight, cocoon shell percentage and pupation rate) were most affected by the substitution of parents. The values of additive genetic variance, Baker's coefficient, ratio σ2gca/σ2sca and heritability in four studied traits including cocoon weight, cocoon shell weight, cocoon shell percentage and number of cocoons per liter showed that these traits are under additive genetic effect. Moreover, they had a higher value in Chinese mothers than the Japanese mother crosses. The trait of cocoon weight per 10,000 larvae was also controlled by non-additive genetic effects, and the substitution of parents did not affect their genetic parameters. The pupation rate in the direct crosses was due to additive genetic effects, but in the reverse crosses was affected by non-additive genetic effects. In general, the narrow sense heritability for all traits was higher in Chinese-shape than in Japanese-shape mothers. 

    Conclusions

    In the present study, similar and close performances of the Chinese mother and Japanese mother hybrids were determined except for cocoon weight and cocoon shell weight which was different in almost 33% of reciprocal hybrids. The crosses effect in the line × tester ANOVA supported the result of mean comparison for reciprocal hybrids evaluation. Further field investigations can be carried out to select the hybrids suitable for different geographical conditions.

    Keywords: Heritability, Hybrid Selection, Line × Tester Analysis, Reciprocal Crossing, Silkworm
  • معین تاند، محمدباقر زندی باغچه مریم*، مرادپاشا اسکندری نسب، محمد عبدلی

    مطالعه حاضر با هدف بررسی خصوصیات ژنتیکی و فنوتیپی مرتبط با صفات عملکردی در اسب های پرشی ایران شامل زمان پایان مسابقه (RCT) و تعداد خطاهای اسب در مسابقه (NEC) و رتبه در پایان مسابقه (REC) انجام شد. به منظور برآورد مولفه های واریانس، وراثت پذیری و همبستگی ژنتیکی نرم افزارهای GIBBS1F90 و THRGIBBS1F90 استفاده شد. وراثت پذیری (h2)  با استفاده از مدل تک صفتی و چندصفتی برای صفات RCT، NEC و REC به ترتیب 02/0 و 08/0، 13/0 و 23/0، 16/0 و 29/0 برآورد شد. همبستگی ژنتیکی بین صفات RCT و NEC، RCT و NEC و هم چنین NEC و REC به ترتیب 38/0، 36/0 و 65/0 برآورد شد. میانگین قابلیت اعتماد برآوردشده (r2) با استفاده از مدل تک صفتی و چندصفتی برای صفات RCT، NEC و REC به ترتیب60/0 و 69/0، 62/0 و 73/0، 58/0 و 66/0 بود. نتایج به دست آمده حاکی از آن است که صفات موردبررسی وراثت ‍‍پذیری پایینی دارند. از بین صفات عملکردی صفت REC دارای بیش ترین وراثت پذیری بوده و ازآنجاکه این صفت با صفات RCT و NEC دارای همبستگی ژنتیکی مثبت است، انتخاب براساس این صفت موجب پیشرفت در صفات دیگر نیز می شود. نتایج حاصل از مطالعه حاضر اهمیت استفاده از مدل های چندصفتی در برنامه های اصلاح نژاد را برجسته می کنند زیرا استفاده از این مدل ها می تواند منجر به برآوردهای دقیق تری از وراثت پذیری و بهبود دقت و قابلیت اعتماد در تخمین ارزش های ارثی شود.

    کلید واژگان: ارزش اصلاحی، اسب های ورزشی، بیزین، قابلیت اعتماد، وراثت پذیری
    Moein Taned, Mohammadbagher Zandi *, Morad Pasha Eskandarinasab, Mohammad Abdoli
    Introduction

    Accurate estimation of genetic and phenotypic variance enhances the selection of superior horses and serves as a valuable tool for the long-term improvement of the sport horse population. Therefore, this study was conducted to estimate the variance components for performance traits of sport horses using the Bayesian method.

    Materials and Methods

    A database was created using 49,026 records from 1499 horses collected between 2017 and 2020 from the Iranian Equestrian Federation. The sport performance traits examined were race completion time (RCT), number of errors in competition (NEC), and rank at the end of the competition (REC). Analysis of variance and Duncan's multiple comparison tests were used to determine the significance of environmental effects, and genetic parameters were estimated using a Gibbs sampling method. R software was utilized to evaluate environmental effects, fit the model, and estimate reliability, variance components, heritability, and genetic correlations, with the GIBBS1F90 and THRGIBBS1F90 software used for estimation. The statistical model included fixed effects for birth year, sex, age, breed, height of obstacles, and level of difficulty of the event, as well as random effects for rider, date, city of competition, and additive genetic effect.

    Results and Discussion

    Heritability (h2) was estimated using single-trait and multi-trait models for the traits RCT, NEC, and REC, respectively, as 0.02 and 0.08, 0.13 and 0.23, 0.16 and 0.29. The estimated genetic correlations between the traits RCT and NEC, RCT and REC, and NEC and REC were 0.38, 0.36, and 0.65, respectively. The mean estimated reliability (r2) using single-trait and multi-trait models for the traits RCT, NEC, and REC were 0.60 and 0.69, 0.62 and 0.73, 0.58 and 0.66, respectively. The heritability values of different traits can vary, and a specific trait may exhibit different levels of heritability across various populations. The estimated heritability of RCT, NEC, and REC fell within the range of values reported in various horse populations and it was <0.01–0.41, 0.07–0.38, and 0.02–0.23, respectively. These estimates demonstrate genetic variation in the traits within the study population, and their alignment with other studies increases confidence in the estimated values.

    Conclusion

    The results of the present study indicated that the heritability of the traits studied was low. Among the performance traits, REC showed the highest heritability. Due to its positive genetic correlation with RCT and NEC, selecting for REC could potentially improve the other traits as well. These findings emphasize the importance of using multi-trait models in breeding programs, as they can provide more accurate heritability estimates and enhance the precision and reliability of breeding value predictions.

    Keywords: Bayesian, Breeding Value, Heritability, Reliability, Sport Horses
  • Neda Farzin *, Abolghasem Seraj
    The aim of the current study was to estimate the genetic and environmental parameters for weekly egg weights using a random regression model in wild and white Japanese quails. The base population included 300 wild and white Japanese quails, with a mating ratio of 1:2 (one male with two females). Four mating groups including pure and cross-breeding methods, were considered to produce the next generation. Eggs were collected and numbered based on their sire and dam. At the fifth week of age, 508 female quails were transferred to the laying cages. The data on egg weight was recorded from the seventh to fifteenth week of age. Nine random regression models were analyzed to determine the best orders of Legendre polynomials. The model with first and second-order Legendre polynomials for additive genetic and permanent environmental effects, respectively, indicated the lowest AIC value and was chosen as the appropriate model. The heritability estimates and the ratios of the permanent environment to the phenotypic variance of weekly egg weights ranged from 0.09 to 0.35 and from 0.08 to 0.51, respectively. The effect of permanent environmental factors on the average weight of laid eggs decreased with increasing laying weeks, followed by an increase in the additive genetic effect on the occurrence of this trait. The estimates of genetic and phenotypic correlations between weekly egg weights varied from 0.59 to 0.98 and from 0.21 to 0.51, respectively. As a result, because of higher heritability estimates for later ages, selection to improve weekly egg weight is better performed based on at least the fifth week of the laying period onward. In conclusion, due to high positive genetic correlations among weekly egg weights, the selection basis of each weekly part record can lead to improving the consecutive weekly egg weights.
    Keywords: Egg Weight, Heritability, Japanese Quail, Random Regression Model
  • Sajad Gholizadeh, Pouya Zamani, Farhad Ghafouri-Kesbi *
    The structure of the fixed and random parts of the genetic evaluation model plays a significant role in fitting data and the estimation of genetic parameters for economic traits in livestock. The present study was conducted to investigate the effect of different fixed and random effects combinations in an animal model framework on the general properties of the model and estimates of the genetic parameters for milk production traits. Traits studied were 305-day milk production (305-MY, 15920 records), fat percentage (FP, 27954 records), protein percentage (PP, 26183 records), average daily milk production (ADM, 30954 records) and milk somatic cell score (SCS, 25408 records) in Isfahan Holstein cows. In general, 54 scenarios were studied which differed in fixed and random parts of the model. Variance components were estimated using the animal model fitting restricted maximum likelihood (REML) procedure. The best model for each trait was selected based on the Bayesian Information Criterion (BIC). Results showed that for all traits studied, models in which the effect of contemporary groups Herd-Year-Season (HYS) or Herd-Year-Month (HYM) were fitted as the random or fixed effect together with age at the first calving and inbreeding as a classified fixed effect or covariate lead to a significantly better data fit instead of fitting herd, year, season and month of calving separately. For each trait, a wide range of heritability was obtained by fitting 54 models. Based on the best models, the estimates of heritability for 305-MY, ADM, FP, PP and SCS were 0.33, 0.28, 0.21, 0.16 and 0.61, respectively. It was concluded that a single model should not be used for analyzing all milk production traits and that for each trait a series of models which differ in random and fixed parts should be tested to find the most suitable model which describes the data best. Fitting the effects of herd and year, season and month of calving as contemporary groups the HYS or HYM was recommended for genetic evaluation of milk production traits as resulted in better data fit. Depending on the trait, inbreeding and age at first calving can be fitted as a classified fixed effect or as a covariate.
    Keywords: Holstein cow, variance components, contemporary groups, Inbreeding, heritability
  • ندا فرزین*، مهلا عجم، ابوالقاسم سراج

    هدف تحقیق حاضر بررسی اثر ژنتیکی افزایشی بر صفات وزن تخم، وزن زرده و میزان اسیدهای چرب زرده و برآورد توارث پذیری این صفات بود. در این پژوهش، از 150 بلدرچین ژاپنی سفید (شامل 50 نر و 100ماده) به عنوان نسل مولد یا پایه (فاقد هرگونه اطلاعات شجره‏ای) استفاده شد. در نسل F2، 100 بلدرچین ماده در سن 5 هفتگی، به طور تصادفی انتخاب شدند و به قفس های تخم گذاری انتقال یافتند. صفات مورد مطالعه شامل وزن تخم، وزن زرده و میزان اسیدهای چرب زرده بود. مولفه های واریانس و کوواریانس و پارامترهای ژنتیکی صفات با استفاده از مدل حیوانی چند صفتی و نرم افزار Wombat برآورد گردید. وراثت پذیری وزن تخم و وزن زرده به ترتیب 45/0 و 38/0 محاسبه شد. این برآوردها برای اسیدهای چرب زرده از 27/0 (اسید پالمیتولییک) تا 45/0 (اسید پالمتیک) متغیر بود. همبستگی ژنتیکی بین وزن تخم و اسیدهای چرب زرده، کم و از 01/0 (بین وزن تخم و اسید لینولییک) تا 10/0 (بین وزن تخم و اسید استیاریک) بود. همبستگی ژنتیکی وزن زرده و مقدار اسیدهای چرب بیشتر و در دامنه ای از 10/0 (بین وزن زرده و اسید لینولنیک) تا 51/0 (بین وزن زرده و اسید استیاریک) بود. براساس این نتایج می توان پیش بینی کرد که انتخاب ژنتیکی در جهت افزایش وزن زرده تخم در بلدرچین، منجر به افزایش مقدار اسیدهای چرب زرده شود.

    کلید واژگان: وزن زرده، اسید چرب، وراثت پذیری، همبستگی ژنتیکی
    Neda Farzin *, Mahla Ajam, Abolghasem Seraj

    The aim of the present study was to investigate effect of additive genetic on egg weight, yolk weight and yolk fatty acid content and estimation of heritability for these traits. In this research, 150 white Japanese quails (50 males and 100 females) were used as the base population (without any pedigree information). In the F2 generation, 100 female quails were randomly selected at the fifth week of age and transferred to laying cages. The traits included egg weight, yolk weight and yolk fatty acid contents. (Co) Variance components and genetic parameters were estimated using multiple animal models by Wombat software. The estimated heritability for egg weight and yolk weight were 0.45 and 0.38, respectively. These estimates for yolk fatty acids ranged from 0.27 (Palmitoleic acid) to 0.45 (Palmetic acid). Genetic correlations between egg weight and yolk fatty acids were low, ranging from 0.01 (between egg weight and Linoleic acid) to 0.10 (between egg weight and Stearic acid). The higher genetic correlations were between yolk weight and yolk fatty acids, varying from 0.10 (between yolk weight and Linoleic acid) to 0.51 (between yolk weight and Stearic acid). The results showed that selection for increasing the yolk weight could lead to producing eggs with more contents of yolk fatty acids.

    Keywords: Yolk weight, Fatty acid, heritability, Genetic correlation
  • ارسلان برازنده*
    پژوهش کنونی با هدف استفاده از فراتحلیل برای برآورد میانگین وزنی پارامترهای ژنتیکی صفات طول، قطر و درصد الیاف کرک با ادغام نتایج مطالعات پیشین جهت نیل به نتایجی با صحت بالاتر انجام گرفت. به این منظور از اطلاعات 14 مقاله مرتبط منتشر شده طی سال های 1367 تا 1400 استفاده شد. مدل فراتحلیل با اثرات تصادفی برای تخمین پارامترهای ژنتیکی، اشتباه استاندارد و فاصله اطمینان 95 درصدی صفات با استفاده از بسته Metafor در نرم افزار R بکار گرفته شد. مقدار میانگین وزنی ضریب وراثت پذیری صفات طول، قطر و درصد الیاف کرک به ترتیب 047/0 ± 24/0، 053/0 ± 42/0 و 103/0± 60/0 محاسبه گردید. نتایج بیانگر آن است که صفات مرتبط با الیاف کرک در بزهای کرکی وراثت پذیری های بالا دارند و بنابراین انتخاب ژنتیکی مستقیم و گزینش افراد با شایستگی مطلوب می تواند باعث بهبود عملکرد این صفات گردد. بالاترین مقدار همبستگی ژنتیکی و فنوتیپی بین درصد الیاف کرک و طول الیاف کرک (84/0و 54/0) و کمترین همبستگی ژنتیکی و فنوتیپی بین صفت درصد الیاف کرک و صفت قطر الیاف کرک (38/0و 35/0) به دست آمد. کاهش شدید اشتباه استاندارد تخمین وراثت پذیری صفات در روش فراتحلیل در نتیجه تجمیع نتایج و افزایش حجم نمونه نشان دهنده افزایش صحت تخمین نتایج است. پارامترهای ژنتیکی برآورد شده می توانند در توسعه برنامه های اصلاحی مرتبط با بهبود صفات الیاف کرک در بزهای کرکی استفاده شود. لذا نتایج حاصل از فراتحلیل می تواند موجب توسعه برنامه های اصلاح نژادی به ویژه در نژادهایی با تعداد رکورد ناکافی، گردد.
    کلید واژگان: بز، کشمیر، متاآنالیز، وراثت پذیری، همبستگی
    Arsalan Barazandeh *
    By aggregating the previous studies, the present study aimed to perform a meta-analysis to estimate the weighted average of the genetic parameters of fiber length, fiber diameter and percentage yield of fiber in cashmere goats to increase the accuracy of estimations. The data of 14 related published papers between 1989 and 2021 were used. A model with random effects was used to estimate the genetic parameters, standard error and 95% confidence range of traits by using Metafor package in R environment. The weighted average of heritability estimates for length, diameter and percentage yield were 0.24 ± 0.047, 0.42 ± 0.053 and 0.60 ± 0.103, respectively. The obtained results indicated that the studied traits have high heritability estimates and therefore the direct genetic selection can lead to the improvement of the performance of these traits. The highest estimate of genetic and phenotypic correlations were obtained between the percentage yield and the fiber length as 0.84 and 0.54, respectively. The lowest genetic and phenotypic correlations were obtained between the percentage yield and the fiber diameter as 0.38 and 0.35, respectively. Sharp reductions in the standard errors of the heritability estimates due to aggregating the results and increasing the sample size, improve accuracy of the corresponding estimates. The genetic parameters estimated in the present study may be used for developing the breeding programs to improve the fiber traits in Cashmere goats. Therefore, the results of meta-analysis study can improve the breeding programs, especially in breeds with insufficient records.
    Keywords: Goat, Cashmere, Meta-Analysis, heritability, Correlation
  • یوسف نادری*، میثم لطیفی
    مقدمه و هدف

    برای ایجاد یک برنامه انتخابی مناسب، برآورد پارامترهای ژنتیکی و محیطی، اجزای مختلف صفات مربوط به رشد، مورد نیاز است. نسبت افزایش وزن روزانه به وزن متابولیکی را نسبت کلیبر می گویند. در بیشتر مطالعات انجام شده در این صفت، اثر کروموزم های وابسته به جنس نادیده گرفته شده و فرض می شود که اثرات مستقیم ژنتیکی، تحت تاثیر کروموزم های اتوزومی است. بنابراین، هدف از مطالعه ی حاضر برآورد مولفه های (کو)واریانس کروموزوم های اتوزومی و وابسته به جنس در صفات کلیبر در بز نژاد مرخز بود.

    مواد و روش ها

    در این تحقیق، از داده های مورد استفاده توسط مرکز اصلاح نژاد بز نژاد مرخز که در بین سال های 1371 الی 1393 گردآوری شده بود، استفاده شد. صفات مورد بررسی شامل: نسبت کلیبر از تولد تا شیرگیری (KR1)، از شیرگیری تا شش ماهگی (KR2)، از شش تا نه ماهگی (KR3) و از نه تا دوازده ماهگی (KR4) بود. تعیین اثرات ثابت با استفاده از، رویه GLM نرم افزار SAS انجام شد. اثرات ثابت مدل شامل سال تولد، جنسیت، تیپ تولد و سن مادر بود. همچنین، اثرات تصادفی شامل اثرات ژنتیکی مستقیم افزایشی کروموزوم های اتوزومی، اثرات ژنتیکی افزایشی کروموزم جنسی، اثرات ژنتیکی مادری، اثرات محیطی دایمی مادری و اثرات باقی مانده بود. برآورد اجزای واریانس و پارامترهای ژنتیکی با الگوریتم میانگین اطلاعات بیشترین درست نمایی محدودشده و با شش مدل حیوانی برآورد شد. از آزمون معیار اطلاعات آکاییک (AIC) برای انتخاب مناسب ترین مدل برای هر صفت، استفاده شد.

    یافته ها

    مناسب ترین مدل، برای صفات KR1 ، KR2 ، KR3  و KR4  به ترتیب مدل های ششم، اول، چهارم و اول بود. براساس بهترین مدل، وراثت پذیری های مستقیم اتوزومی برای صفات KR1 ، KR2 ، KR3  و KR4  به ترتیب، برابر 0/41، 0/019، 0/172 و 0/020، بود. وراثت پذیری های مستقیم وابسته به کروموزوم جنسی به ترتیب برابر 0/008، 0/021، 0/049 و 0/023 بود. وراثت پذیری های مادری برآورد شده برابر صفات KR1 و KR3  به ترتیب 0/106 و 0/057 بود. اثر محیطی دایمی مادری برای صفت KR1 ، 0/064 برآورد شد. همبستگی های ژنتیکی اتوزومی، کروموزم های وابسته به جنس و فنوتیپی، به ترتیب در دامنه ی 0/52- تا 0/90، 0/943- تا 0/652 و 0/001- تا 0/312- متغیر بود.

    نتیجه گیری

    نتایج این مطالعه نشان می دهد، بخشی از واریانس فنوتیپی تحت تاثیر واریانس کروموزوم جنسی می باشد. بنابراین، وارد کردن اثر کروموزوم جنسی به مدل ممکن است، منجر به تخمین دقیق تری از وراثت پذیری مستقیم اتوزومی می شود.

    کلید واژگان: پارامتر ژنتیکی، وراثت پذیری، همبستگی ژنتیکی
    Yousef Naderi*, Meysam Latifi
    Introduction and Objective

    Estimates of genetic and environmental parameters of different component traits related to growth are needed to develop a proper selection program. The Kleiber ratio (KR) is defined as average daily gain as a proportion of metabolic body weight. Most studies conducted in KR ignored the effect of sex-linked chromosomes and assumed that direct genetic effects were influenced by autosomal chromosomes. Therefore, the purpose of this study was to estimate (Co)variance components of both autosomal and sex-Linked chromosomes for KR in Markhoz goat.

    Material and Methods

    In the present study, the data were collected from 1992 to 2014 at Markhoz goat breeding station in Kurdistan province, Iran. The traits were kleiber ratio from birth to weaning (KR1), kleiber ratio from weaning to six months of age (KR2), kleiber ratio from weaning to six months of age (KR2), kleiber ratio from six to nine months of age (KR3) and kleiber ratio from nine to twelve months of age (KR4). The GLM procedure of the SAS software was used to determine significant fixed effects. The model accounting for fixed effects included year, sex, birth type and age of doe. In addition, random effects included direct additive genetic effects of autosomal chromosomes, direct additive genetic effects of sex-linked, maternal genetic effects, maternal permanent environmental effects and residual effects. (Co)variance components and genetic parameters were estimated using six different single-trait analysis via Average Information algorithm of Restricted Maximum Likelihood method using WOMBAT software. Akaike’s Information Criterion (AIC) test was applied to select the most apropariate model for each trait.

    Results

    The most suitable model for KR1, KR2, KR3 and KR4 traits were the sixth, first, fourth and first models, respectively. Based on the best models, the estimated direct autosomal heritabilities were 0.410, 0.019, 0.172 and 0.020 for KR1, KR2, KR3 and KR4, respectively. The estimated sex-linked direct heritabilities were 0.008, 0.021, 0.049 and 0.023 for KR1, KR2, KR3 and KR4, respectively. The maternal heritability for KR1 and KR3 were 0.106 and 0.057, respectively. The maternal permanent environmental effect of 0.064 was estimatedfor KR1. The autosomal, sex-chromosome and phenotypic correlations between traits were ranged from -0.518 to 0.901, -0.943 to 0.652 and -0.001 to 0.312, respectively.

    Conclusion

    The results of this study showed that a considerable ratio of the phenotypic variance is explained by sex-linked chromosome effects. Therefore, including the sex-linked chromosome effect in the model may lead to a more precise estimates of direct autosomal heritability.

    Keywords: Genetic parameter, Genetic correlation, Heritability
  • سعید نیسی*، جمال فیاضی، هدایت الله روشنفکر
    زمینه ی مطالعاتی و هدف

    منحنی های شیردهی، اغلب به منظور ارایه خلاصه ای از الگوی تولید شیر، کارآیی بیولوژیکی و اقتصادی حیوان استفاده می شوند. در این پژوهش، به منظور توصیف منحنی شیردهی گاومیش های خوزستان، از شش مدل ریاضی (وود، ویلمینک، چند جمله ای معکوس، لگاریتمی مختلط، علی و شفر و دایجکسترا) استفاده شد.

    روش کار

    بدین منظور از 103760 رکورد تولید شیر روز آزمون 14280 راس گاومیش تولید شیر دوره ی شیردهی اول که در سال های 1372 تا 1399 توسط مرکز جهاد کشاورزی استان خوزستان ثبت و جمع آوری شده بود، استفاده شد. فراسنجه های منحنی شیردهی با استفاده از رویه ی NLIN نرم افزار SAS نسخه 9.4 و رکوردهای روز آزمون برآورد گردید. مقایسه ی شایستگی مدل ها براساس ضریب تبیین (R2) ، ریشه ی میانگین مربعات خطا (RMSE) و معیار اطلاعات آکاییک (AIC) انجام شد.

    نتایج

    مدل ریاضی وود با داشتن بالاترین ضریب تببین و مقادیر پایین تر شاخص RMSE و AIC نسبت به مدل های دیگر، بهترین برازش منحنی شیردهی را ارایه داد. این مدل با دقت بیشتری نسبت به سایر توابع، می تواند زمان رسیدن به اوج تولید شیر را برآورد نمایند. اوج تولید شیر گاومیش های خوزستان (30/8 کیلوگرم در روز) به طور متوسط در هفته ی دهم (روز 69) پس از زایش بود. اثرفصل زایش بر روی صفات شیردهی معنی داری نبود در حالی که سال زایش اثری معنی دار داشت (05/0>P). مقدار وراثت پذیری صفات منحنی شیردهی در آغاز تولید (a)، شیب گامه ی افزایشی (b) و شیب گامه ی کاهشی (c) به ترتیب 57/0، 27/0 و 48/0 بود. همبستگی ژنتیکی بین صفات منحنی شیردهی در دامنه 55/0- (a و b) تا 196/0 (b و c) قرارداشت.

    نتیجه گیری نهایی:

     به طور کلی، ارزیابی مدل های توصیف کننده منحنی شیردهی با استفاده از مدل های غیر خطی و تجزیه و تحلیل چند صفتی، گامی موثر در شناسایی گاومیش های با ظرفیت ژنتیکی بالا جهت بهبود و افزایش بازده تولید شیر ایفا می نماید.

    کلید واژگان: گاومیش خوزستان، منحنی شیردهی، مدل های ریاضی، وراثت پذیری
    Saeid Neysi *, Jamal Fayazi, Hedayatollah Roshanfekr
    Introduction

    Improving the performance of economic traits of domestic livestock by means of sounds breeding programs could elaborate meeting the protein demands of the human world population. The water buffalo, also called the domestic water, bears up substantial value in terms of milk and meat production. Khuzestani buffalo, the subspecies of domestic Asian water buffalo (Bubalus bubalis) has become a strategic animal species in Khuzestan province, Iran, due to its ability to adapt to adverse environmental conditions, low quality feed sources dependency and high quality products. Archaeological and ancient records show little evidence regarding the expansion of the Khuzestani buffalo. Many people in the region depend on this species for their livelihoods than on any other domestic animal. In this regards, the buffalo lactation could have crucial role in farmers' economy. In general, having knowledge of lactation curve, may shed some lights on management and farm-based operation of milk production system. The lactation curve is a graphical representation tool that reflects the effect of couple of numbers of different factors on milk production during lactation; therefore, it is useful in making better management decisions. In other words, it could summarize the pattern of milk production, biological and economic efficiency of the animal. Several models have been suggested to describe the lactation curves. In this study, in order to estimate the association between different fitted lactation curves and their comparisons on Khuzestani buffalo, six nonlinear mathematical models (Wood, Wilmink, inverse polynomial, Complex logarithm, Ali and Schaefer and Digestra) were used.

    Material and methods

    The data used in this study, consisted of 103760 test day records of milk yield of 14280 buffalu in the first parity that collected by the Agricultural Jihad Center of Khuzestan province during 1993 to 2020. The Microsoft Excel was used to edit the data. Animals with unknown birth and calving dates were removed. Those fixed effects that had significant effects on the coefficients of lactation curve (P < 5%) were included in the final model. The lactation curve parameters were estimated using the nonlinear regression procedure (NLIN) of SAS software version 9.4 on test day records. Evaluation of goodness of fit was based on the coefficient of determination (R2), root mean square error (RMSE) and Akaike information criterion (AIC). The (Co) variance components were estimated by multi-trait animal model using restricted maximum likelihood method run in WOMBAT software.

    Results and discussion

    Descriptive statistics of milk production of Khuzestani buffaloes based on 103760 records from different areas shown that the average milk production was 8.048 kg, standard deviation was 3.047 and coefficient of variation was 37.87 as well. Wood's mathematical model provided the best fit of the lactation curve due to the highest value for the R2 and lower values for RMSE and AIC compared to the other models and it obtained as 0.88. The a, b and c parameter values of Wood’s model were estimated 6.91, 0.057 and 0.00083, respectively. The results showed that the wood model was able to estimate the time of peak milk yield more accurately than the other models. The peak milk yield of Khuzestani buffaloes (8.30 kg/d) appeared on average in the tenth week (day 69) after calving. The heritability of lactation curve traits for initial yield (a), upward slope of the curve (b) and downward slope of the curve (c) were obtained 0.57, 0.27 and 0.48, respectively. In this study, the persistency(s) value for typical lactations were lactation curve were estimated 7.49. The genetic correlations among lactation curve parameters ranged from -0.55 (upward slope of the curve and initial yield) to 0.138 (upward and downward slope of the curve), whereas the phenotypic correlations ranged from -0.35 (Between initial yield and the upward slope of the curve) to +0.196 (b and c). The solutions of mixed model equations revealed that Buffalo with IDs 3436, 3410, 3360, 2868, 24, and 3174 had the highest breeding value for coefficient a. In other hand, buffalo 3438, 3409, 3418, 3361, 3282, and 3169 showed the highest breeding value in the coefficient b. Finally, the buffaloes that obtained the highest hereditary value in different coefficients of lactation curve were introduced as the superior buffaloes. By knowing the best buffaloes in terms of breeding value for parameters a and b, it is possible to select buffaloes to be parent for next generation. In general, evaluating lactation curve equations using nonlinear models and multi-trait analysis is an effective step in identifying buffaloes with high genetic potential to improve and increase milk production efficiency. The results of the present study showed that among the six mathematical models studied, Wood's incomplete gamma function had more viability for fitting the lactation curve of Khuzestani buffalo. The effect of calving season was not significant on lactation parameters while year of calving had a significant effect. Negative and moderate genetic correlations between initial production parameters (a) and upward slope (b) of the lactation curve indicate that keeping on with higher initial production level will have a lower rate of increase until peak production. In the present study, multivariate analysis led to the relationship of all coefficients of the lactation curve with each other and as a result more realistic parameters were estimated for them. It is suggested that in future studies, a computer-aided economic production system be designed and the economic coefficients related to the parameters of the lactation curve be estimated for integration into the selection index. Also, in order to improve the performance of Khuzestani buffalo, it is recommended to study the genomic relationship of milk production curve parameters.

    Keywords: Khuzestan buffalo, Lactation curve, Mathematical models, Heritability
  • میثم لطیفی، یوسف نادری*
    هدف از این مطالعه بررسی اثر خطای تعیین ژنوتیپ نشانگر و نوع طرح آمیزشی و انتخابی (ارزش اصلاحی و فنوتیپی) در صحت ارزیابی ژنومی تحت سطوح مختلف وراثت پذیری (05/0، 1/0 و 3/0) و تراکم نشانگرها (500، 1000 و 1500) به وسیله ی شبیه سازی در صفت آستانه ای بود. ژنومی شامل دو کروموزوم هر یک به طول 100 سانتی مورگان، و بر روی هر کروموزوم 125 QTL شبیه سازی شد. به منظور شبیه سازی صفت آستانه ای، 20 درصد از فنوتیپ برتر در هر نسل دو و مابقی یک در نظر گرفته شدند. ارزش اصلاحی ژنومی با استفاده از اثرات نشانگری برآورد شده توسط روش آماری بیز B پیش بینی شد. صحت ارزیابی های ژنومی نشان داد که طرح آمیزشی و انتخابی ارزش اصلاحی در مقایسه با طرح آمیزشی و انتخابی فنوتیپی صحت بیشتری دارد. صحت ارزیابی های ژنومی با افزایش خطای تعیین ژنوتیپ در هر دو طرح آمیزشی و انتخابی ارزش اصلاحی و فنوتیپی کاهش یافت. نتایج نشان داد با افزایش درصد خطای تعیین ژنوتیپ، افزایش تراکم نشانگر منجر به افزایش صحت پیش بینی ارزیابی ژنومی می شود.
    کلید واژگان: طرح آمیزشی و انتخابی، وراثتپذیری، روش بیز B
    Meysam Latifi, Yousef Naderi *
    The purpose of this study was to investigate the effect of different rates marker genotyping error and the type of mating and selection design (breeding value and phenotypic) on the accuracy of genomic prediction assessment under different levels of heritability (0.05, 0.1 and 0.3) and marker density (500, 1000 and 1500) by simulation in threshold trait. The genome consisted of two chromosomes, each 100 cM, and 125 QTLs were randomly distributed on each chromosome. In order to simulation a threshold trait, 20 percent of the top-level phenotypes were considered to be 2, and the rest were considered as 1. Genomic breeding value was predicted using marker effects estimated by Bayes B statistical method. Comparison of the accuracy of genomic evaluations showed that selection and mating designs of breeding value was more accurate than the selection and mating designs of phenotypic. The accuracy of genomic prediction decreased with increasing marker genotyping error in both selection and mating designs of breeding value and phenotypic. The results showed that with increasing the percentage of marker genotyping error, increasing the number of markers leads to increasing the accuracy of genomic breeding value prediction.
    Keywords: Selection, mating design, heritability, Bayes B
  • نسترن آهنگران، سید عباس رافت*، غلامعلی مقدم، جلیل شجاع

    زمینه مطالعاتی:

     طول عمر گاوها در سود دهی یک مزرعه شیری اهمیت بسزایی دارد و حذف گاوها در نتیجه اختلالات اصلی سلامتی خطر مهمی است که امروزه سیستمهای تولیدی را تهدید می کند. ظهور این اختلال ها می تواند به بخش هایی از قبیل فاکتورهای محیطی و مدیریتی ربط داده شود. اما، مدارکی دال بر وجود یک جزء ژنتیکی نیز برای هر کدام وجود دارد.

    هدف

    هدف از این مطالعه گزارش آماری از میزان شیوع دو بیماری مهم ورم پستان بالینی و متریت ، بررسی عوامل محیطی و ژنتیکی موثر بر این بیماریها، تخمین وراثت پذیری صفات بیماری و اندازه گیری همبستگی میان صفات بیماری و تولیدی در یک گله تجاری گاو هلشتاین است.

    روش کار

    به منظور این پژوهش اطلاعات تندرستی و تولیدی گله ی 1600 راسی گاو هلشتاین در استان آذربایجان شرقی و همچنین اطلاعات شجره ای این حیوانات مورد بررسی و آنالیز قرار گرفت. داده ها از تعداد جمعا 5052 دوره ی شیردهی از 1796 راس گاو هلشتاین- فریزین که در فواصل زمانی 1388-1384 زایمان کرده بودند گرفته شده است. در این مطالعه با استفاده از متغیرهای تولید شیر305روز، نوبت زایش، سال گوساله زایی،فراوانی وقوع دو بیماری ورم پستان بالینی و متریت در دام ها با استفاده از نرم افزار SAS با به کارگیری رویه ی لجستیک پیش بینی شده است. داده های تولیدی به کار رفته برای آنالیز مربوط به همان دوره ی شیردهی است که گاو در آن به عنوان دارنده یا فاقد یک بیماری ثبت شده است. یک گاو برای تمام بیماری هایی که در سرتاسر همه ی دوره ی شیردهی اش اتفاق افتاده است مورد بررسی قرار گرفته است. پارامترژنتیکی برآورد شده در این تحقیق وراثت پذیری صفات بیماری بوده واین برآوردها با به کارگیری نرم افزار ASRmlصورت گرفته است.

    نتایج

    درصد حیوانات مبتلا در گله برای ورم پستان 3.11 درصد و برای متریت 1.67 درصد بدست آمد که متریت نرخ وقوع پایینتری نسبت به ورم پستان دارد. همچنین میانگین فاصله زایش تا وقوع بیماری 129.5 روز برای ورم پستان و 167.3 روز برای متریت به دست آمد

    نتیجه گیری نهایی: 

    تجزیه و تحلیل ارتباط بین شیوع متریت و شیر 305 روز، نوبت زایش، سال گوساله زایی و فصل گوساله زایی نشان داد که هیچکدام از فاکتور های خطر بررسی شده اثری بر روی وقوع بیماری ورم پستان بالینی نداشتند. بیماری متریت وراثت پذیری کمتری نسبت به بیماری ورم پستان بالینی دارد.

    کلید واژگان: گاو هلشتاین- فریزین، ورم پستان بالینی، متریت، شیر305 روز، وراثت پذیری
    N Ahangaran, Seyed Abbas Rafat *, Gh Moghaddam, J Shodja
    Introduction

    The longevity of cows is crucial to the profitability of a dairy farm, and the culling of cows as a result of major health disorders is a significant risk that threatens production systems today. The possibility of taking diseases into account in the selection of dairy cows depends on the economic importance of the diseases. Mastitis and metritis are common diseases among dairy cows that are considered as risk factors for culling cows. The onset of these disorders can be attributed to factors such as environmental and managerial factors, but there is also evidence of a genetic component to each. Many genes are associated with resistance or susceptibility to mastitis and metritis in cattle, and their alleles have been reported. Subclinical mastitis seems to be one of the most important and damaging diseases threatening dairy cattle herds along with reproductive diseases, lameness and possibly some other common diseases such as Para-tuberculosis. Obviously, reducing production costs supports the profitability of dairy farms. By studying the relationship between the incidence rate and health disorders, in order to minimize the deaths due to health disorders, more emphasis has been placed on the health management of cows. The direct and adverse effects of mammary gland disorders (mastitis and nipple injury) on culling are well documented, while there are differences of results on the correlation between reproductive disorders and culling. Contradictory results may be due to differences in the purpose of the study, population, or the methods used. Many factors such as age, breed, production level, and calving season can play a role in the incidence of diseases.

    Aim

    The purpose of this study is to report the prevalence of clinical mastitis and metritis, moreover to investigate environmental and genetic factors affecting these diseases, to estimate the heritability of disease traits and to measure the correlation between disease and production traits in a Holstein cattle herd. Due to the fact that health records are not recorded in the country's farms in a regular and uniform manner, conducting this research is an experiment to collect this type of information so that in the future models can be provided for all Holstein cows in Iran to consider disease relating traits.

    Material and Methods

    Data of 5052 milk yield from 1796 Holstein-Frisian cows has been gathered that had parturition from 2005 to 2009. In this study, using the 305-day milk production variables, parity, year of calving, the frequency of occurrence of clinical mastitis and metritis in cattle diseases using SAS software, using logistic procedure is estimated. The cows have been studied for all the diseases that occurred in all milking period. In logistic regression analysis, the effect of 305 days of milk and other factors in the occurrence of the disorder was investigated as a binary model. The effect of the lactation period in which the disorder was created was included in all analyzes and the fixed effects included milk for 305 days, calving period, calving year and calving season.Log [p. (1-p)] = b0 + b1 * milk305 + b2 * parity + b3 * calveyear + b4 * calve seasonA coefficient of b1 is assigned for the risk factor of milk production, a coefficient of b2 is assigned for the parturition, a coefficient of b3 is assigned for the factor of calving year and a coefficient of b4 is assigned for the factor of calving season. b0 is the logistic regression estimate if there is no predictor other than the response variable in the model. For each estimate of regression coefficients, the probability level, standard error and 95% confidence interval are also calculated. For a particular disease b1, b2, b3 and b4 are regression coefficients. Estimated genetic parameter in this research was heritability of diseases traits that has been done with ASReml software.

    Results and discussion

    Metritis incidence rate is lower than mastitis. The percentage of animals with mastitis and metritis in the herd was 3.11% and 1.67%, respectively. The average calving interval for metritis incidence was 167.3 days and 129.5 days for mastitis. Data analysis of correspondence of metritis and 305 milk yield, parity, the year and the season of calving showed none of the risk factors had relation with the occurrence of clinical mastitis. The heritability of clinical mastitis and metritis were estimated to be 0.27 and 0.23, respectively. We could not find a relationship between milk production and metritis. Can we consider the increase in milk production as a risk factor for disease occurrence? It is very difficult to prove and explain this relationship and there are many contradictions between the results of other studies. From the lack of a proven correlation between milk production and the occurrence of diseases, it can be concluded that if proper management and nutrition provided based on the biological needs of high-yielding cows, then cows with high milk production will not necessarily suffer from diseases in comparison with low-yielding cows.Genetic studies have shown a positive correlation between mastitis and milk production. Erb (1987) and Dehu and Martin (1984) concluded that high milk production could not be a risk factor for mastitis. A study of Ayrshire cows in Finland found that cows with higher milk production during the previous lactation period were at increased risk for mastitis (Grun et al. 1989 and Grun et al. 1990). There are few documented findings on the association between milk production and the incidence of disease. Of course, it should be borne in mind that "milk production" is not the only risk factor for the disease. Concerning diseases in Holstein dairy cattle it seems the occurrence of the disease can also be the result of breeding and nutrition conditions and management. However, identifying all relevant factors and determining their quality and relative importance is difficulty accessible. It is also not easy to estimate all possible interactions between production and disease traits, even with the efficiency of today's computer technology.

    Conclusion

    In dairy cattle genetic improvement programs, we suggest to record and estimate the breeding values for disease traits and consider them in multi-trait selections among elite sires. The estimated heritability of metritis was lower than clinical mastitis. Keywords: Holstein-Friesian cows, clinical mastitis, metritis, milk 305 days, heritability.

    Keywords: Holstein-friesian cows, Clinical mastitis, Metritis, 305 day milk yield, Heritability
  • یاسین شهرکی، ابوالقاسم سراج*، ندا فرزین

    هدف از تحقیق حاضر، برآورد فراسنجه های ژنتیکی صفات مرتبط با کیفیت خارجی و داخلی تخم در بلدرچین ژاپنی بود. از داده‏های 570 قطعه بلدرچین تخم‏گذار حاصل از تلاقی‏های خالص و آمیخته‏ دو سویه‏ بلدرچین ژاپنی وحشی و سفید استفاده شد. پرندگان جمعیت پایه به چهار گروه تلاقی (دو گروه خالص و دو گروه آمیخته) تقسیم‏بندی شدند. اجزای (کو)واریانس و فراسنجه های ژنتیکی صفات مورد پژوهش با استفاده از مدل چند‏صفتی به روش حداکثر درست نمایی محدود شده با نرم افزار ASREML برآورد شدند. تفاوت بین گروه‏های تلاقی در بیشتر صفات مرتبط با کیفیت تخم (به جز صفات وزن تخم و وزن سفیده) معنی‏دار نبود. وزن تخم و وزن سفیده در بلدرچین‏های تخم‏گذار حاصل از تلاقی بلدرچین‏های ژاپنی نر و ماده سفید کمتر بود (05/0>P). وراثت‏پذیری صفات مرتبط با کیفیت خارجی تخم از 16/0 تا 39/0 و صفات مرتبط با کیفیت داخلی تخم از 10/0 تا 31/0 متغیر بود. همبستگی‏های ژنتیکی صفات مرتبط با کیفیت خارجی تخم از 33/0- تا 71/0 و برای صفات مرتبط با کیفیت داخلی تخم از 37/0- تا 55/0 متغیر بود. در پژوهش حاضر، وراثت‏پذیری صفات مرتبط با کیفیت تخم در حد متوسط برآورد شد که نشان‏دهنده نقش قابل ‏توجه ژن‏های افزایشی بر بروز این صفات است. علاوه ‏بر این، همبستگی ژنتیکی مثبت بین وزن تخم و صفات مرتبط با کیفیت خارجی تخم و همچنین همبستگی ژنتیکی مناسب بین بیشتر صفات مرتبط با کیفیت داخلی تخم، نشان‏ می‏دهد که انتخاب در جهت بهبود هر یک از صفات ذکر شده به‏طور غیرمستقیم می‏تواند منجر به بهبود سایر صفات مرتبط با کیفیت تخم شود.

    کلید واژگان: بلدرچین ژاپنی، صفات مرتبط با کیفیت تخم، وراثت‏ پذیری، همبستگی ژنتیکی
    Y. Shahraki, A. Seraj *, N. Farzin
    Introduction

    Quails are beneficial for their meat and eggs and have been the focus of poultry breeders in recent decades. Egg quality traits are usually divided into external (such as shell quality and egg weight) and internal (like yolk and albumen parameters) traits. Shell characteristics are important factors to determine egg quality. The breakage of quail eggs can be occurred in various processes such as collection, packaging, and transportation or in the setter and hatcher devices, and leads to serious economic problems for the breeders in the poultry industry. The size and weight of the quail egg are important factors in the marketability of this product. From an economic point of view, the yolk is the most valuable part of the egg. The yolk is a concentrated source of nutrients, as well as it has a significant effect on the weight of the chicken. The ratio of yolk to white in quail eggs has been reported to be 35 to 65, which is higher in comparison to laying hens. Egg quality can be affected by different factors such as genotype, breed, strain, age, management, nutrition, temperature, and illness. Although there have been many studies to determine the environmental factors on traits related to egg quality in quail, there are few studies to investigate the effect of genetic factors and different mating systems on the occurrence of these traits. Therefore, the present study was conducted to estimate genetic parameters of external and internal egg quality traits in wild and white strains of Japanese quails.

    Materials and methods

    A total number of 570 laying quails were obtained from pure and cross-mating groups of wild and white Japanese quails. The base population was divided into four mating groups including two pure and two crossed mating groups (group 1: wild male × wild female; group 2: white male × wild female; group 3: wild male × white female, and group 4: white male × white female). The studied traits included external (egg weight, length, and width, shell weight and thickness, and egg shape index) and internal (yolk weight, albumen weight, yolk index, albumen index, and internal egg quality unit) egg quality traits. The effects of hatch and mating groups on traits related to egg quality were investigated. The means of traits related to external and internal egg quality were compared using the Duncan test. (Co)Variance components and genetic parameters of traits related to external and internal quality traits were estimated by multiple trait animal models and restricted maximum likelihood using ASREML software.

    Results and discussion

    The effect of the hatch on egg weight, shell weight, and albumen weight was significant (P<0.05) and the eggs from the second and third hatches showed higher egg weight, shell weight, and albumen weight in comparison to the first hatch (P<0.05). The difference between mating groups was not significant (P>0.05) except for albumen and egg weights. The laying quails from the pure white mating group showed lower albumen and egg weights (P<0.05). The heritability estimates for traits related to external egg quality varied from 0.16 (egg shape index) to 0.39 (egg weight). These estimates for traits related to internal egg quality ranged from 0.10 (internal quality unit) to 0.31 (yolk weight). Genetic correlations were estimated from -0.33 (between egg length and egg shape index) to 0.71 (between egg length and width) for traits related to external egg quality, and from -0.37 (between yolk weight and yolk index) to 0.71 (between albumen weight and albumen height) for traits related to internal egg quality, respectively. Phenotypic correlations varied from -0.32 (between egg length and egg shape index) to 0.61 (between egg length and width) for traits related to external egg quality, and from 0.11 (between yolk index and albumen height) to 0.59 (between the internal quality unit and albumen height) for traits related to internal egg quality, respectively.

    Conclusions

    Heritability estimates for traits related to egg quality were moderate which indicates the significant effect of additive genes on the occurrence of these traits. Positive genetic correlations between egg weight and traits related to external egg quality, as well as appropriate genetic correlations between traits related to internal egg quality showed that selection based on some egg traits like egg weight and internal egg unit can effectively lead to the improvement of other egg quality traits.

    Keywords: Japanese quail, Egg quality traits, Heritability, Genetic correlation
  • حسن احمدیان، امیر رشیدی*، پیمان محمودی
    هدف از این پژوهش برآورد پارامترهای ژنتیکی صفات وزن بدن در بزهای مرخز با استفاده از مدل های رگرسیون تصادفی بی اسپلاین بود. تعداد 19549 رکورد صفات وزن بدن جمع آوری شده طی سال های 1399-1371 در ایستگاه پرورش و اصلاح نژاد بز مرخز سنندج، آنالیز شد. مدل مورد استفاده جهت آنالیز داده ها شامل عوامل ثابت (سال تولد، جنس، نوع تولد و سن مادر) و عوامل تصادفی شامل آثار ژنتیکی افزایشی مستقیم، ژنتیکی افزایشی مادری، محیطی دایمی دام و محیطی دایمی مادری با فرض واریانس باقیمانده همگن و ناهمگن در طول زمان بود. برای مقایسه مدل ها از معیارهای اطلاعات آکایک (AIC) و بیزی (BIC) استفاده و مدل bspq.4.4.4.4 به عنوان بهترین مدل انتخاب شد. مقدار وراثت پذیری مستقیم برای وزن های تولد، سه ماهگی، شش ماهگی، نه ماهگی و یک سالگی به ترتیب 14/0، 16/0، 08/0، 28/0 و 26/0 برآورد گردید. مقادیر همبستگی ژنتیکی بین وزن های تولد و سه ماهگی، تولد و شش ماهگی، تولد و نه ماهگی، تولد و یک سالگی، سه ماهگی و شش ماهگی، سه ماهگی و نه ماهگی، سه ماهگی و یک سالگی، شش ماهگی و نه ماهگی، شش ماهگی و یک سالگی و نه ماهگی و یک سالگی به ترتیب 91/0-، 22/0، 38/0، 21/0، 56/0، 26/0-، 30/0، 62/0، 86/0و 77/0 برآورد گردید. بیشترین همبستگی فنوتیپی بین وزن نه ماهگی و یک سالگی (82/0) و کمترین همبستگی بین وزن تولد با سه ماهگی و شش ماهگی (12/0) برآورد گردید. نتایج حاصل نشان داد که وزن نه ماهگی معیار مناسبی برای انتخاب در بزهای مرخز می باشد.
    کلید واژگان: تابع بی اسپلاین، رگرسیون تصادفی، مولفه های واریانس، وراثت پذیری
    Hassan Ahmadiyan, Amir Rashidi *, Peyman Mahmoudi
    This study aimed to estimate the genetic parameters of body weight traits in Markhoz goats, using B-spline random regression models. The data used in this study included 19549 records collected during 29 years (1992-2021) in Markhoz goat Breeding Research Station, located in Sanandaj, Iran. The model used to analyze data included fixed effects (year of birth, sex, type of birth and age of dam) and random effects including direct additive genetic, maternal additive genetic, permanent environmental and maternal permanent environmental assuming homogeneous and heterogeneous residual variance during the time. Akaike (BIC) and Bayesian (BIC) information criteria were used to compare the models and bspq.4.4.4.4 was selected as the best model. The direct heritability values for birth, 3-month, 6-month, 9-month and 12-month weights were estimated to be 0.14, 0.16, 0.08, 0.28 and 0.26, respectively. Genetic correlation between body weights at birth and 3-month, birth and 6-month, birth and 9-month, birth and 12-month, 3-month and 6-month, 3-month and 9-month, 3-month and 12-month, 6-months and 9-month and 9-month and 12-month were 0.22, 0.38, 0.21, 0.56, -0.26, 0.30, 0.62, 0.86 and 0.77, respectively. The highest phenotypic correlation was between the weight of 9-month and 12-month (0.82) and the lowest correlation was between birth weight and 3-month and 6-month (0.12). The results showed that the 9-month weight is a good criterion for selection in Markhoz goats.
    Keywords: B-spline, heritability, random regression, variance components‎
  • Sedigheh Gholipour, Navid Ghavi Hossein-Zadeh *, Abdol Ahad Shadparvar, Hassan Darmani Kuhi
    This study aimed to perform a meta-analysis to combine genetic parameters for economically important traits of Iranian indigenous chickens. A data set of information related to different growth, reproduction, and egg quality traits including 336 heritability estimates and 433 genetic correlations from 45 articles published between 2007 and 2019 were used. Meta-analysis was performed based on a random-effects model to calculate the effect size for genetic parameters. Also, statistic and Q test were used to measure the degree of heterogeneity among studies. The mean heritability for growth traits ranged from 0.222 (body weight at hatch) to 0.34 (body weight at 12 weeks of age). The lowest and highest estimates of the heritability for reproductive traits were 0.181 (number of eggs produced) and 0.449 (age at sexual maturity), respectively. The mean heritability estimate for egg internal quality traits varied from 0.211 (yolk weight) to 0.355 (albumin weight) and for external quality traits of eggs in the range from 0.261 (shell strength) up to 0.332 (Shell weight). Also, the mean genetic correlation estimates between growth traits, and between reproductive traits ranged from 0.297 to 0.878 and -0.678 to 0.788, respectively. Also, the genetic correlation between internal and external quality traits of eggs ranged from -0.069 to -0.979 and -0.012 to -0.856, respectively. The estimates reported in the present study are appropriate to be used in breeding programs when reliable genetic parameter estimates are not accessible for economically important traits in native fowls.
    Keywords: Fowls, Heritability, Genetic correlation, Performance traits, Systematic review
  • Genet Zewdie, Tesfaye Sisay, Dereje Beyene, Selam Meseret, K. Suk Kim, Hailu Dadi

    Availing information on genetic parameters of traits of interest for a given population is a prerequisite for effective genetic improvement programs. The objective of this research was to estimate the covariance components and genetic parameters of birth weight (BW), weaning weight (WW), and growth rate (ADG) traits of Boran cattle maintained at Did Tuyera cattle breeding ranch. The total number of animals considered in this study was 1162 (634 males and 528 females). The fixed effects included in the animal model for the analysis of growth traits were calf birth year, season of birth, and sex of calf. Pedigree was pruned using Relax 2 program. Covariance components were estimated using the Average Information-Restricted Maximum Likelihood (AI)-REML procedure as implemented in the DMUV.6 program. The data for BW (1120), WW (1144), and ADG (1144) were collected between 1999 and 2005. The estimation of the BW, WW, and ADG of Boran's calves was optimized by evaluating two models that either include or exclude the maternal genetic effects. The best model was chosen according to the log-likelihood ratio tests. The genetic parameters were estimated using bivariate models (DMU) package, fitting univariate and bivariate models with a restricted maximum likelihood algorithm. The sex of the calf significantly influenced BW and ADG (p< 0.01). Calf birth year and birth season significantly (p< 0.001) influenced BW, WW, and ADG. The direct heritability estimates for BW, WW, and ADG were 0.17, 0.38, and 0.46, respectively. A larger phenotypic correlation coefficient was found between BW and WW (0.28). The direct and maternal genetic correlations for BW, WW, and ADG were -0.47, -0.45, and -0.47, respectively. The relatively high heritability estimates observed (model 1) for WW (0.38) and ADG (0.46) indicated that reasonable genetic improvement for those traits might be possible through selection.

    Keywords: Boran cattle, correlation, heritability, indigenous breeds, selection
  • سعید زره داران*، فاطمه قباخلو، محمد مهدی شریعتی
    زمینه مطالعاتی

     در این مطالعه فراتحلیلی، از مطالعات قبلی در زمینه تخمین پارامترهای ژنتیکی صفات تولیدی و تولیدمثلی در مرغان بومی ایران استفاده شد. این مقالات (33 مقاله) بین سال های 1386 تا 1395 منتشر شده اند. اطلاعات مورد استفاده شامل وراثت پذیری، همبستگی های ژنتیکی و فنوتیپی صفات تولیدی و تولید مثلی شامل وزن یک روزگی، وزن هشت هفتگی، وزن دوازده هفتگی، تعداد تخم مرغ، وزن تخم مرغ، سن بلوغ جنسی و وزن بلوغ جنسی بودند.

    مواد و روش ها

    مدل فراتحلیل با اثرات تصادفی با استفاده از بسته Metacor نرم افزار R نسخه 3،3،1 و نرم افزار Comprehensive meta-Analysis (CMA) نسخه 3 برای محاسبه میانگین وزنی صفات مورد بررسی در مرغان بومی ایران مورد استفاده قرار گرفت.

    نتایج

    به دلیل استفاده همزمان از نتایج کلیه مطالعات موجود در زمینه تخمین پارامترهای ژنتیکی در مرغ های بومی ایران در فراتحلیل، خطای برآورد پارامترهای ژنتیکی و به تبع آن محدوده اطمینان 95% این پارامترها در مقایسه با نتایج حاصل از مطالعات انفرادی به طور قابل ملاحظه ای کاهش یافت. این کاهش بیانگر افزایش صحت برآوردها در اثر تجمیع نتایج می باشد. با توجه به نتایج حاصل از فراتحلیل، بالاترین وراثت پذیری صفات تولیدی و تولیدمثلی مربوط به صفت وزن تخم مرغ با مقدار عددی 42/0 و پس از آن وزن بلوغ جنسی با مقدار عددی 41/0 بود. کمترین میزان وراثت پذیری مربوط به صفت تعداد تخم مرغ با مقدار عددی 20/0 و پس از آن وزن یک روزگی با مقدار عددی 25/0 بود. بالاترین همبستگی ژنتیکی مثبت بین صفات تولیدی و تولیدمثلی مربوط به همبستگی بین صفت وزن هشت هفتگی با وزن دوازده هفتگی با مقدار 86/0 و پس از آن همبستگی بین صفت وزن دوازده هفتگی و وزن بلوغ جنسی با مقدار عددی 64/0 بود. بالاترین همبستگی ژنتیکی منفی مربوط به همبستگی صفت سن بلوغ جنسی با تعداد تخم مرغ با مقدار عددی 66/0- و پس از آن تعداد تخم مرغ با میانگین وزن تخم مرغ با مقدار عددی 19/0- بود. به دلیل ترکیب نتایج مطالعات گذشته با استفاده از روش فراتحلیل، استفاده از پارامترهای ژنتیکی حاصل از این مطالعه با صحت بالاتر می تواند نقش موثری در طراحی موفق برنامه های اصلاح نژادی مرغ های بومی کشور و ارتقا پیشرفت ژنتیکی در این پرندگان داشته باشد.

    کلید واژگان: فراتحلیل، مرغ بومی ایران، وراثت پذیری، همبستگی ژنتیکی و فنوتیپی
    Saeed Zerehdaran *, Fateme Ghobakhloo, Mohammad Mahdi Shariati
    Introduction

    Native fowl have become valuable genetic resources over the years due to their adaptation to harsh conditions in rural areas (Emamgholi et al 2009). Native fowl, despite their lower growth rate and lower egg production compared with broiler strains such as Ross and Cobb and layer strains such as Hy-Line and Lohman, perform much better in the rural system due to their good disease resistance and production under adverse nutritional and environmental conditions (Lakhi et al 2013). Breeding programs have a significant effect on improving the genetic structure of native fowl (Kiani manesh et al 2002). The purpose of this study was to combine the results of studies related to estimating genetic parameters for productive and reproductive traits in native fowl using meta-analysis method in order to improve the accuracy of estimations. In addition, the use of meta-analysis method eliminates the existing differences between studies by examining the heterogeneity between them (Field and Gillett 2010; Lortie et al 2013; Hooijmans et al 2014). Increasing the accuracy of estimates can consequently increase genetic improvement through selecting proper candidates to be parents of next generations. Higher performance will increase the courage of farmers to keep native fowl and therefore it help to keep the birds as a valuable genetic source for the future.

    Materials and Methods

    In this meta-analysis study, previous studies in the field of estimating genetic parameters of productive and reproductive traits in Iranian native fowl were collected and used. These articles consisted of 33 articles which were published between years 2007 and 2016. Information used in current study included heritability, genetic and phenotypic correlations of productive and reproductive traits. These traits consisted of birth weight, weight at eight weeks of age, weight at twelve weeks of age, egg number, egg weight, age at sexual maturity and weight at sexual maturity. Cochran test and I2 criterion were used for testing heterogenty among used articles. The range of heterogeneity among studies could be from zero to 100 percent. Ranges of 0 to 25 percent, 25 to 50 percent, 50 to 75 percent and 75 to 100 percent indicate very low, low, moderate and high heterogeneity among studies, respectively. Fixed meta-analysis model is usually recommended for very low and low heterogeneity among studies and random meta-analysis model is normally used for moderate to high rates of heterogeneity among studies. Due to high heterogenty observed among studies in present study, random effects model meta-analysis was performed using Metacor package R software version 3,3,1 and Comprehensive Meta-Analysis (CMA) software version 3. The weighted average of the heritability, genetic and phenotypic correlations were calculated accordingly.

    Results and Discussion

    According to the results, the highest heritability among productive and reproductive traits was related to egg weight (0.42) and then weight at sexual maturity (0.41). The lowest heritability was related to egg number with a value of 0.20 and then birth weight with a value of 0.25. The highest positive genetic correlation between productive and reproductive traits was estimated between weight at eight and weight at twelve weeks of age (0.86) and then between weight at twelve weeks of age and weight at sexual maturity (0.64). The highest negative genetic correlation was related to the correlation between age at sexual maturity and egg number (-0.66), then egg number and egg weight (-0.19). Due to combing the results of individual studies using meta-analysis, the standard error of estimations for genetic parameters and consequently their 95% confidence interval were significantly reduced compared to individual studies (Bayssa et al 2021). This reduction indicates an increase in the accuracy of the estimates due to aggregating the results of individual studies (Field and Gillett 2010). A comparison between the results of independent studies and the results of meta-analysis shows a significant reduction in estimated standard errors for heritability and genetic and phenotype correlations in the meta-analysis method. For example, the amount of estimated standard error related to heritability of weight at twelve weeks of age in the meta-analysis was calculated to be 0.0009, while the range of reported standard error in the articles for the heritability of this trait was from 0.05 to 0.08. For weight at eight weeks of age the amount of standard error of heritability in the meta-analysis was estimated to be 0.0009, but the range reported for standard error of heritability for this trait in the articles was zero to 0.06. Similar reduction in the amount of estimated standard error were observed for reproductive traits. For example for egg number, the amount of error in the meta-analysis was estimated to be 0.0013, but the range reported in the articles was 0.01 to 0.13. The amount of estimated standard error related to egg weight in the meta-analysis was calculated to be 0.0009, while the range reported in the studied articles was from 0.004 to 0.07. This decreasing trend was similarly observed for other studied traits, which is due to the aggregation of the results obtained from independent studies.

    Conclusion

    The results of this study showed that the use of meta-analysis method by aggregating the results of individual studies, will increase the accuracy of genetic parameters of productive and reproductive traits in native fowls through increasing the sample size and reducing estimated standard errors. Therefore, by taking into consideration that Iranian native fowl are economically important animals and considerable demands for their products in the country, using genetic parameters obtained from this study with higher accuracy can play an effective role in the successful design of breeding programs for native fowls and promote genetic improvement in native fowl in Iran.

    Keywords: Genetic, phenotypic correlation, Heritability, Iranian native fowl, Meta-analysis
  • مرتضی مختاری*
    وجود تفاوت های ژنتیکی در بروز صفات بین دو جنس را می توان برای تدوین برنامه های کارامدتر ارزیابی ژنتیکی دام ها به کار برد. پژوهش کنونی با هدف بررسی وجود دو شکلی جنسی در صفات وزن تولد، وزن شیرگیری و وزن شش ماهگی بره های نر و ماده نژاد کرمانی و واکاوی ژنتیکی آن ها، با استفاده از اطلاعات شجره ای و رکوردهای جمع آوری شده طی سال های 1372 تا 1392 در ایستگاه اصلاح نژاد گوسفند کرمانی، واقع در شهرستان شهربابک، استان کرمان انجام شد. مقادیر دو شکلی جنسی، که به صورت نسبت میانگین وزن بره های نر به بره های ماده تعریف شد، در زمان تولد، شیرگیری و شش ماهگی به ترتیب 04/1، 09/1 و13/1 به دست آمدند. از شش مدل حیوانی دو صفته، که ترکیبات مختلف اثرات ژنتیکی افزایشی مستقیم، ژنتیکی افزایشی مادری و محیط دایمی مادری را در بر داشتند، برای واکاوی ژنتیکی دو شکلی جنسی صفات استفاده شد. به این منظور، هر صفت در بره های نر و ماده به عنوان یک صفت مجزا در نظر گرفته شد و مدل های دو صفتی برازش شده برای هر صفت با معیار اطلاع بیزی (BIC) با هم مقایسه شدند. وراثت پذیری مستقیم وزن های تولد، شیرگیری و شش ماهگی در بره های نر به ترتیب 11/0، 35/0 و 32/0 و در بره های ماده به ترتیب 10/0، 36/0 و23/0 برآورد شدند. همبستگی های ژنتیکی مستقیم بین جنسی برای وزن تولد، شیرگیری و شش ماهگی در بره های نر و ماده به ترتیب 92/0، 93/0 و 00/1 برآورد شدند. وجود این همبستگی های ژنتیکی مثبت و بالا نشان داد که صفات مورد بررسی در بره های نر و ماده کرمانی توسط ژن های مشترک بسیاری کنترل می شوند. همچنین با توجه به وجود همبستگی های ژنتیکی بین جنسی مثبت و بالا برای صفات مورد بررسی می توان نتیجه گرفت انتخاب در بره های نر برای صفات مورد مطالعه سبب ایجاد پاسخ همبسته مثبت در بره های ماده نژاد کرمانی می گردد.
    کلید واژگان: دو شکلی جنسی، وراثت پذیری، صفات رشد، گوسفند
    Morteza Mokhtari *
    Genetic differences in expression of traits between sexes can be applied for developing efficient genetic evaluation of animals. The aim of the present study was to investigate the existence of sexual dimorphism (SD) in birth weight (BW), weaning weight (WW) and six months weight (6MW) and also correspondingly the genetic analysis of SD in male and female Kermani lambs applying pedigree information and records, collected from 1993 to 2013 in Breeding Station of Kermani sheep,. The SD values, defined as mean body weight of male lambs to mean body weight of female lambs were 1.04, 1.09 and 1.13 for BW, WW and 6MW, respectively. Six bivariate animal models, contained different combinations of direct additive genetic, maternal additive genetic and maternal permanent environmental effects, were used for genetic analysis of SD. Each body weight traits were considered as distinct traits in male and females. The considered bivariate animal models was evaluated via Bayesian Information Criterion (BIC). Direct heritability estimates for BW, WW and 6MW in male lambs were 0.11, 0.35 and 0.32, respectively. The corresponding estimates in female lambs were 0.10, 0.36 and 0.23, respectively. Cross-sex genetic correlations for BW, WW and 6MW were 0.92, 0.93, and 1.00, respectively. High and positive genetic correlations indicated that the studied traits in male and female lambs are control by common genes. Due to high and positive cross-sex genetic correlations for the studied body weight traits it may be concluded that selection in male lambs would result in a positive correlated response in females.
    Keywords: Growth Traits, heritability, sexual size dimporphism, Sheep
  • سونیا زکی زاده*، داوودعلی ساقی، مهدی الهی نرشیزی، حسین مهربان
    هدف پژوهش کنونی برآورد مولفه های واریانس، تخمین پارامترهای ژنتیکی و همبستگی های اجزاء منحنی رشد با مدل های غیرخطی مانند برودی، گمپرتز، لجستیک و ون برتالانفی در گوسفند کردی بود. داده ها شامل 17659 رکورد وزن تولد تا یک سالگی تعداد 5074 گوسفند حاصل از 162 قوچ و 1968 میش بودند که طی سال های 1375 تا 1392 در ایستگاه پرورش و اصلاح نژاد گوسفند کردی شمال خراسان متولد شده بودند. پارامترهای منحنی با استفاده از رویه غیرخطی NLIN نرم افزار SAS تخمین زده شدند وسپس با توجه به جنسیت حیوان به روش برازش انفرادی، مقادیر وزن بلوغ A، B ثابت انتگرال  و نرخ بلوغ K جداگانه محاسبه شد. پس از آزمودن اثرات ثابت جنس، تیپ، سال و ماه تولد و سن مادر مولفه های واریانس با استفاده از نرم افزار BLUPF90 تخمین زده شدند. وراثت پذیری وزن بلوغ در تمام مدل ها پایین بود (05/0 تا 09/0) که نشان دهنده پایین بودن سهم واریانس ژنتیکی از واریانس فنوتیپی است. لذا، برای دست یابی به پیشرفت ژنتیکی قابل قبول و صحت بالا، به رکوردبرداری منحنی رشد تعداد بیشتری بره به ازای هر قوچ و میش و بهبود شرایط محیطی نیاز است. با توجه به همبستگی ژنتیکی و محیطی مثبت و بالا A-B می توان انتظار داشت با انتخاب حیوانات با وزن تولد بالاتر و یا بهبود شرایط محیطی، وزن بلوغ بیشتری به دست آید که مستلزم بررسی تاثیر آن روی افزایش سخت زایی می باشد. همبستگی های ژنتیکی و فنوتیپی متوسط و منفی A-K در مدل ها بیانگر ارتباط منفی بین سرعت رسیدن بلوغ و وزن بلوغ است.
    کلید واژگان: مدل غیر خطی، منحنی رشد، همبستگی ژنتیکی و وراثت پذیری
    Sonia Zakizadeh *, Davoudali Saghi, Mehdi Elahi Torshizi, Hossein Mehrban
    The aims of this study were to estimate variance components, prediction of genetic parameters and correlations of growth curve parameters of nonlinear models such as Broody, Gompertz, Logistic and von in Kurdi sheep breed. Data comprised of 17659 body weights from birth to yearling of 5074 lambs belonging to 162 rams and 1968 ewes from 1996 to 2013. Growth parameters were estimated by NLIN procedure of SAS V.9.4., and parameters including A, B and K were calculated by individual fit according to the sex of the animal. Variance components were estimated by a mixed model of BLUPF90 and considering the influences of fixed effect including sex, birth type, year and month of birth. Heritability of mature weight was low in all models (0.05 to 0.09) and showed the low participation of genetic variance from the phenotypic variance. Therefore, to achieve the desired genetic gain and high accuracy, more records of lamb growth parameters are required for each ewe and ram, as well as, the improvement of environmental circumstances. Regarding high positive genetic and environmental correlations of A-B, it is expected that selection of animals with higher birth weight or improving the environmental circumstances, lead to a height mature weight, which needs more investigation over the increasing of lambing ease. The medium and negative genetic and phenotypic correlations between A-K imply the negative relationship between the mature rate and weight.
    Keywords: Nonlinear Model, Growth Curve, Genetic correlation, heritability
نکته
  • نتایج بر اساس تاریخ انتشار مرتب شده‌اند.
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