Preliminary Information of Iranian Lizard Leishmania Promastigote Transcriptome Sequencing by Next -Generation Sequencing (NGS) Method

Message:
Article Type:
Research/Original Article (دارای رتبه معتبر)
Abstract:
Background

A lizard Leishmania has been isolated from a lizard (Agama agilis) in Iran. Its genome sequence has not been determined, so far.

Methods

The study was done at Shahid Beheshti University of Medical Sciences, Tehran, Iran in 2017-2023. Leishmania promastigotes were cultured in RPMI1640 culture medium and collected at logarithmic phase by centrigugation. Parasite RNA was extracted by the Qiagene standard kit and its quantity and quality was determined and sequenced by NGS method with Illumina PE machine at BGI Company (China).

Results

The number of 8316 mRNA, 83 tRNA, 63 rRNA, 83 ncRNA, 5 snRNA, 1039 snoRNA, 36 region, and 3 repeat regions, 8343 CDS, 9597 Exon and 9292 Genes were identified in promastigote of Iranian lizard Leishmania.

Conclusion

Genomic elements of Iranian lizards Leishmania (with unique characteristics) were determined and identified by NGS system.

Language:
English
Published:
Iranian Journal of Parasitology, Volume:18 Issue: 3, Jul-Sep 2023
Pages:
362 to 368
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